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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs57475167 chr2:132196668 G/A CCDC74B chr2:130896860-130902707:- 0.37 6.55 1.49E-10 Box Plot
THCA rs5748651 chr22:17284540 A/G CABIN1 chr22:24407642-24574596:+ 0.45 5.88 7.75E-9 Box Plot
THCA rs5748651 chr22:17284540 A/G CBY1 chr22:39052641-39069859:+ 0.44 5.92 6.09E-9 Box Plot
THCA rs5748651 chr22:17284540 A/G DGCR2 chr22:19023795-19109967:- 0.56 6.16 1.51E-9 Box Plot
THCA rs5748651 chr22:17284540 A/G SGSM3 chr22:40766595-40806293:+ 0.4 5.88 7.61E-9 Box Plot
THCA rs5748651 chr22:17284540 A/G TRMT2A chr22:20099389-20104915:- 0.43 6.01 3.75E-9 Box Plot
THCA rs57489065 chr20:17411720 G/A PNLIP chr10:118305443-118327367:+ 0.21 6.1 2.18E-9 Box Plot
THCA rs5751613 chr22:23587894 A/G POM121L10P chr22:25053448-25054732:- -0.34 -6.15 1.59E-9 Box Plot
THCA rs5751719 chr22:24082815 A/G IGLL3 chr22:25713888-25716191:+ 0.41 7.26 1.61E-12 Box Plot
THCA rs5751901 chr22:24992266 C/T GGTLC2 chr22:22986946-22990373:+ -0.26 -6.12 1.92E-9 Box Plot
THCA rs57525517 chr14:66810280 G/GAT ATP6V1D chr14:67761088-67826982:- 0.42 7.32 1.07E-12 Box Plot
THCA rs57526558 chr8:11310568 T/G SGK223 chr8:8175258-8244008:- 0.38 7.15 3.36E-12 Box Plot
THCA rs57547536 chr5:90057869 A/G DHRS7 chr14:60610838-60636574:- -0.46 -6.09 2.33E-9 Box Plot
THCA rs5756267 chr22:37015194 A/G PPIL2 chr22:22020298-22054304:+ 0.43 6.45 2.75E-10 Box Plot
THCA rs5756267 chr22:37015194 A/G TUG1 chr22:31366663-31375381:+ 0.37 5.89 7.37E-9 Box Plot